BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B01SP1|AL427254
(551 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1031 0.0
>3x_Contig1619
Length = 7770
Score = 1031 bits (511), Expect = 0.0
Identities = 532/548 (97%)
Strand = Plus / Plus
Query: 1 ttgctatcgtdttctcagccttaattcaaggagtatcaagaaacccatcattaaaagata 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 ttgctatcgtattctcagccttaattcaaggagtatcaagaaacccatcattaaaagata 1031
Query: 61 cattattcccattcgcaattttaggataaagagtgagtcctatttttcttatttatccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 cattattcccattcgcaattttaggataaagagtgagtcctatttttcttatttatccca 1091
Query: 121 taatcttattaagattatgggatataattagaatataaaattgggtgaattgcaagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 taatcttattaagattatgggatataattagaatataaaattgggtgaattgcaagaaac 1151
Query: 181 tcctagtatttaataattatattaaatatggacaatttgcagcgaagtttataacaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 tcctagtatttaataattatattaaatatggacaatttgcagcgaagtttataacaacct 1211
Query: 241 atattatattattatataatasssccssgcggctcgtccaaccctacggttagacgatgc 300
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1212 atattatattattatataataaccccacgcggctcgtccaaccctacggttagacgatgc 1271
Query: 301 cgcgtggggagttataaaaacgttcaacgactagataatgagttaggttaacaataattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 cgcgtggggagttataaaaacgttcaacgactagataatgagttaggttaacaataattt 1331
Query: 361 atccacgagcgcccaatatcaaatagattatrtttgataatgacatagtctgaacaatat 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1332 atccacgagcgcccaatatcaaatagattatatttgataatgacatagtctgaacaatat 1391
Query: 421 agaratatattgrgctaatatattavntvvvtvttaggccaacatatacagttgctttat 480
||| |||||||| |||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 1392 agaaatatattgagctaatatattaaataaatattaggccaacatatacagttgctttat 1451
Query: 481 cagaagctacaggattattctgtttaatgatttcattcttattattatdcgctgtataat 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1452 cagaagctacaggattattctgtttaatgatttcattcttattattatacgctgtataat 1511
Query: 541 aataatat 548
||||||||
Sbjct: 1512 aataatat 1519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4469
Number of Sequences: 1807
Number of extensions: 4469
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 551
length of database: 10,358,551
effective HSP length: 16
effective length of query: 535
effective length of database: 10,329,639
effective search space: 5526356865
effective search space used: 5526356865
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.4 bits)